/*@z33.c:Database Service:OldCrossDb(), NewCrossDb(), SymToNum()@*************/ /* */ /* THE LOUT DOCUMENT FORMATTING SYSTEM (VERSION 3.22) */ /* COPYRIGHT (C) 1991, 2000 Jeffrey H. Kingston */ /* */ /* Jeffrey H. Kingston (jeff@cs.usyd.edu.au) */ /* Basser Department of Computer Science */ /* The University of Sydney 2006 */ /* AUSTRALIA */ /* */ /* This program is free software; you can redistribute it and/or modify */ /* it under the terms of the GNU General Public License as published by */ /* the Free Software Foundation; either Version 2, or (at your option) */ /* any later version. */ /* */ /* This program is distributed in the hope that it will be useful, */ /* but WITHOUT ANY WARRANTY; without even the implied warranty of */ /* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the */ /* GNU General Public License for more details. */ /* */ /* You should have received a copy of the GNU General Public License */ /* along with this program; if not, write to the Free Software */ /* Foundation, Inc., 59 Temple Place, Suite 330, Boston MA 02111-1307 USA */ /* */ /* FILE: z33.c */ /* MODULE: Database Service */ /* EXTERNS: OldCrossDb, NewCrossDb, DbCreate(), DbInsert(), */ /* DbConvert(), DbClose(), DbLoad(), DbRetrieve(), */ /* DbRetrieveNext() */ /* */ /*****************************************************************************/ #define INIT_DBCHECK_NUM 107 #include "externs.h" /*****************************************************************************/ /* */ /* DBCHECK_TABLE */ /* */ /* A symbol table holding all non-galley cross references, basically */ /* implementing a function (sym, tag) -> fpos (if any). */ /* */ /* dtab_new(newsize) New empty table, newsize capacity */ /* dtab_insert(x, S) Insert new (sym, tag) pair x into S */ /* dtab_retrieve(sym, tag, S) Retrieve (sym, tag) pair from S */ /* dtab_debug(S, fp) Debug print of table S to file fp */ /* */ /*****************************************************************************/ typedef struct { int dbchecktab_size; /* size of table */ int dbchecktab_count; /* number of objects held */ OBJECT dbchecktab_item[1]; } *DBCHECK_TABLE; #define dtab_size(S) (S)->dbchecktab_size #define dtab_count(S) (S)->dbchecktab_count #define dtab_item(S, i) (S)->dbchecktab_item[i] #define hash(pos, sym, tag, S) \ { FULL_CHAR *p = tag; \ pos = (unsigned long) sym; \ while( *p ) pos += *p++; \ pos = pos % dtab_size(S); \ } static DBCHECK_TABLE dtab_new(int newsize) { DBCHECK_TABLE S; int i; ifdebug(DMA, D, DebugRegisterUsage(MEM_DBCHECK, 1, 2*sizeof(int) + newsize * sizeof(OBJECT))); S = (DBCHECK_TABLE) malloc(2*sizeof(int) + newsize * sizeof(OBJECT)); if( S == (DBCHECK_TABLE) NULL ) Error(33, 1, "run out of memory enlarging dbcheck table", FATAL, no_fpos); dtab_size(S) = newsize; dtab_count(S) = 0; for( i = 0; i < newsize; i++ ) dtab_item(S, i) = nilobj; return S; } /* end dtab_new */ static void dtab_insert(OBJECT x, DBCHECK_TABLE *S); static DBCHECK_TABLE dtab_rehash(DBCHECK_TABLE S, int newsize) { DBCHECK_TABLE NewS; int i; OBJECT link, z; NewS = dtab_new(newsize); for( i = 0; i < dtab_size(S); i++ ) { if( dtab_item(S, i) != nilobj ) { OBJECT ent = dtab_item(S, i); assert( type(ent) == ACAT, "dtab_rehash: ACAT!" ); for( link = Down(ent); link != ent; link = NextDown(link) ) { Child(z, link); dtab_insert(z, &NewS); } DisposeObject(ent); } } ifdebug(DMA, D, DebugRegisterUsage(MEM_DBCHECK, -1, -(2*sizeof(int) + dtab_size(S) * sizeof(OBJECT)))); free(S); return NewS; } /* end dtab_rehash */ static void dtab_insert(OBJECT x, DBCHECK_TABLE *S) { unsigned long pos; OBJECT z, link, y; if( dtab_count(*S) == dtab_size(*S) - 1 ) /* one less since 0 unused */ *S = dtab_rehash(*S, 2*dtab_size(*S)); dtab_count(*S)++; hash(pos, db_checksym(x), string(x), *S); if( dtab_item(*S, pos) == nilobj ) New(dtab_item(*S, pos), ACAT); z = dtab_item(*S, pos); for( link = Down(z); link != z; link = NextDown(link) ) { Child(y, link); if( db_checksym(x) == db_checksym(y) && StringEqual(string(x), string(y)) ) { assert(FALSE, "Dbcheck: entry inserted twice"); } } Link(dtab_item(*S, pos), x); } /* end dtab_insert */ static OBJECT dtab_retrieve(OBJECT sym, FULL_CHAR *tag, DBCHECK_TABLE S) { OBJECT x, link, y; unsigned long pos; hash(pos, sym, tag, S); x = dtab_item(S, pos); if( x == nilobj ) return nilobj; for( link = Down(x); link != x; link = NextDown(link) ) { Child(y, link); if( sym == db_checksym(y) && StringEqual(tag, string(y)) ) return y; } return nilobj; } /* end dtab_retrieve */ #if DEBUG_ON static void dtab_debug(DBCHECK_TABLE S, FILE *fp) { int i; OBJECT x, link, y; fprintf(fp, " table size: %d; current number of items: %d\n", dtab_size(S), dtab_count(S)); for( i = 0; i < dtab_size(S); i++ ) { x = dtab_item(S, i); fprintf(fp, "dtab_item(S, %d) =", i); if( x == nilobj ) fprintf(fp, " "); else if( type(x) != ACAT ) fprintf(fp, " not ACAT!"); else for( link = Down(x); link != x; link = NextDown(link) ) { Child(y, link); fprintf(fp, " %s&&%s", is_word(type(y)) ? SymName(db_checksym(y)) : AsciiToFull("?"), is_word(type(y)) ? string(y) : AsciiToFull("not-WORD!")); } fprintf(fp, "\n"); } } /* end dtab_debug */ #endif static DBCHECK_TABLE DbCheckTable; /* the dbcheck table */ static BOOLEAN DbCheckTableInit = FALSE; /* TRUE if table inited */ /*****************************************************************************/ /* */ /* OldCrossDb Database containing cross references from previous run. */ /* NewCrossDb Writable database of cross references from this run. */ /* */ /*****************************************************************************/ OBJECT OldCrossDb, NewCrossDb; /*****************************************************************************/ /* */ /* #define SymToNum(db, sym, num, gall) */ /* */ /* Set num to the number used to refer to sym in database db. If sym is */ /* not currently referred to in db, create a new number and record sym. */ /* If gall is true, sym is the target of galleys stored in this database. */ /* Store in boolean fields db_targ(link) and is_extern_target(sym). */ /* */ /*****************************************************************************/ #define SymToNum(db, sym, num, gall) \ { OBJECT link, yy; int count; \ count = 0; \ for( link = Down(db); link != db; link = NextDown(link) ) \ { Child(yy, link); \ assert(type(yy)==CROSS_SYM || type(yy)==ACAT, "SymToNum: yy!"); \ if( type(yy) != CROSS_SYM ) continue; \ if( symb(yy) == sym ) break; \ if( number(link) > count ) count = number(link); \ } \ if( link == db ) \ { if( cross_sym(sym) == nilobj ) CrossInit(sym); \ Link(db, cross_sym(sym)); \ link = LastDown(db); \ number(link) = count + 1; \ db_targ(link) = FALSE; \ } \ num = number(link); \ if( gall ) db_targ(link) = is_extern_target(sym) = \ uses_extern_target(sym) = TRUE; \ } /* end SymToNum */ /*@::NumToSym(), DbCreate()@**************************************************/ /* */ /* #define NumToSym(db, num, sym) */ /* */ /* Set sym to the symbol which is referred to in database db by num. */ /* */ /*****************************************************************************/ #define NumToSym(db, num, sym) \ { OBJECT link, y; \ for( link = Down(db); link != db; link = NextDown(link) ) \ { Child(y, link); \ if( type(y) == CROSS_SYM && number(link) == num ) break; \ } \ assert( link != db, "NumToSym: no sym"); \ assert( type(y) == CROSS_SYM, "NumToSym: y!" ); \ sym = symb(y); \ } /* end NumToSym */ /*****************************************************************************/ /* */ /* OBJECT DbCreate(x) */ /* */ /* Create a new writable database with name (i.e. file stem) x and file */ /* position fpos for error messages. */ /* */ /*****************************************************************************/ OBJECT DbCreate(OBJECT x) { OBJECT db = x; debug1(DBS, DD, "DbCreate(%s)", string(db)); assert( is_word(type(x)), "DbCreate: !is_word(type(x))" ); reading(db) = FALSE; db_filep(db) = null; debug1(DBS, DD, "DbCreate returning %s", EchoObject(db)); return db; } /* end DbCreate */ /*@::DbInsert()@**************************************************************/ /* */ /* DbInsert(db, gall, sym, tag, tagfpos, seq, dfnum, dlnum, dfpos) */ /* */ /* Insert a new entry into writable database db. The primary key of the */ /* entry has these three parts: */ /* */ /* gall TRUE if inserting a galley */ /* sym The symbol which is the target of this entry */ /* tag The tag of this target (must be a non-null string) */ /* */ /* tagfpos is the file position that the tag originated from. */ /* There is also an auxiliary key, seq, which enforces an ordering on */ /* entries with equal primary keys but is not itself ever retrieved. This */ /* ordering is used for sorted galleys. The value of the entry has the */ /* following parts: */ /* */ /* dfnum The file containing the object */ /* dfpos The position of the object in that file */ /* dlnum The line number of the object in the file */ /* */ /* If check is TRUE, we need to check whether an entry with this key has */ /* been inserted before. This will never be the case with galley entries. */ /* */ /*****************************************************************************/ void DbInsert(OBJECT db, BOOLEAN gall, OBJECT sym, FULL_CHAR *tag, FILE_POS *tagfpos, FULL_CHAR *seq, FILE_NUM dfnum, long dfpos, int dlnum, BOOLEAN check) { int symnum; OBJECT chk; static int extra_seq = 0; FULL_CHAR buff[MAX_BUFF]; assert( is_word(type(db)), "DbInsert: db!" ); assert( tag[0] != '\0', "DbInsert: null tag!" ); assert( seq[0] != '\0', "DbInsert: null seq!" ); ifdebug(DPP, D, ProfileOn("DbInsert")); debug6(DBS, D, "DbInsert(%s, %s, %s, %s, %s, %s, dlnum, dfpos)", string(db), bool(gall), SymName(sym), tag, seq, dfnum == NO_FILE ? AsciiToFull(".") : FileName(dfnum)); assert(!reading(db), "DbInsert: insert into reading database"); /* if required, check that (sym, tag) not already inserted */ if( check ) { debug2(DBS, DD, " checking %s&&%s, DbCheckTable =", SymName(sym), tag); if( !DbCheckTableInit ) { DbCheckTable = dtab_new(INIT_DBCHECK_NUM); DbCheckTableInit = TRUE; } ifdebug(DBS, DD, dtab_debug(DbCheckTable, stderr)); chk = dtab_retrieve(sym, tag, DbCheckTable); if( chk == nilobj ) { chk = MakeWord(WORD, tag, tagfpos); db_checksym(chk) = sym; dtab_insert(chk, &DbCheckTable); } else { if( file_num(fpos(chk)) > 0 ) Error(33, 4, "cross reference %s&&%s used previously, at%s", WARN, tagfpos, SymName(sym), tag, EchoFilePos(&fpos(chk))); else Error(33, 5, "cross reference %s&&%s used previously", WARN, tagfpos, SymName(sym), tag); } } /* open database index file if not already done */ if( db_filep(db) == null ) { if( StringLength(string(db)) + StringLength(NEW_INDEX_SUFFIX) >= MAX_BUFF ) Error(33, 2, "database file name %s%s is too long", FATAL, no_fpos, string(db), NEW_INDEX_SUFFIX); StringCopy(buff, string(db)); StringCat(buff, NEW_INDEX_SUFFIX); db_filep(db) = StringFOpen(buff, WRITE_BINARY); if( db_filep(db) == null ) Error(33, 3, "cannot write to database file %s", FATAL, &fpos(db), buff); } /* work out database index file entry and append it to file */ if( dfnum != NO_FILE ) { StringCopy(buff, FileName(dfnum)); StringCopy(&buff[StringLength(buff)-StringLength(DATA_SUFFIX)], STR_EMPTY); } else StringCopy(buff, AsciiToFull(".")); SymToNum(db, sym, symnum, gall); ifdebug(DBS, DD, fprintf(stderr, " -> %s%d&%s\t%s\t%ld\t%d\t%s\n", gall ? "0" : "", symnum, tag, seq, dfpos, dlnum, buff); ); fprintf(db_filep(db), "%s%d&%s\t%s\t%s\t%ld\t%d\t%s\n", gall ? "0" : "", symnum, tag, seq, StringFiveInt(++extra_seq), dfpos, dlnum, buff); /* return */ debug0(DBS, DD, "DbInsert returning."); ifdebug(DPP, D, ProfileOff("DbInsert")); } /* end DbInsert */ /*@::DbConvert(), DbClose()@**************************************************/ /* */ /* DbConvert(db, full_name) */ /* */ /* Convert database db from writable to readable, then dispose it. */ /* full_name is TRUE if symbols are to be known by their full path name. */ /* */ /*****************************************************************************/ void DbConvert(OBJECT db, BOOLEAN full_name) { FULL_CHAR oldname[MAX_BUFF+10], newname[MAX_BUFF]; OBJECT link, y; ifdebug(DPP, D, ProfileOn("DbConvert")); debug2(DBS, DD, "DbConvert( %ld %s )", (long) db, string(db)); assert( !reading(db), "DbConvert: reading database"); StringCopy(newname, string(db)); StringCat(newname, INDEX_SUFFIX); StringCopy(oldname, string(db)); StringCat(oldname, NEW_INDEX_SUFFIX); if( db_filep(db) != null ) { fprintf(db_filep(db), "00 %s %s\n", LOUT_VERSION, "database index file"); for( link = Down(db); link != db; link = NextDown(link) ) { Child(y, link); assert( type(y) == CROSS_SYM || type(y) == ACAT, "DbConvert: y!" ); if( type(y) != CROSS_SYM ) continue; fprintf(db_filep(db), "%s %d %s\n", db_targ(link) ? "00target" : "00symbol", number(link), full_name ? FullSymName(symb(y), AsciiToFull(" ")) : SymName(symb(y))); } fclose(db_filep(db)); debug2(DBS, DD, " calling SortFile(%s, %s)", oldname, newname); SortFile(oldname, newname); } else StringRemove(newname); StringRemove(oldname); DeleteNode(db); debug0(DBS, DD, "DbConvert returning."); ifdebug(DPP, D, ProfileOff("DbConvert")); } /* end DbConvert */ /*****************************************************************************/ /* */ /* DbClose(db) */ /* */ /* Close readable database db. */ /* */ /*****************************************************************************/ void DbClose(OBJECT db) { if( db != nilobj && !in_memory(db) && db_filep(db) != NULL ) { fclose(db_filep(db)); db_filep(db) = NULL; } } /* end DbClose */ /*@::DbLoad()@****************************************************************/ /* */ /* OBJECT DbLoad(stem, fpath, create, symbs, in_mem) */ /* */ /* Open for reading the database whose index file name is string(stem).li. */ /* This file has not yet been defined; its search path is fpath. If it */ /* will not open and create is true, try creating it from string(stem).ld. */ /* */ /* symbs is an ACAT of CLOSUREs showing the symbols that the database may */ /* contain; or nilobj if the database may contain any symbol. */ /* */ /* If in_mem is true, this database index is to be kept in internal memory, */ /* rather than an external file, as a speed optimization. */ /* */ /*****************************************************************************/ OBJECT DbLoad(OBJECT stem, int fpath, BOOLEAN create, OBJECT symbs, BOOLEAN in_mem) { FILE *fp; OBJECT db, t, res, tag, par, sym, link, y; int i, lnum, dlnum, num, count, leftp; FILE_NUM index_fnum, dfnum; long dfpos; BOOLEAN gall; FULL_CHAR line[MAX_BUFF], sym_name[MAX_BUFF]; char *gotline; ifdebug(DPP, D, ProfileOn("DbLoad")); debug3(DBS, DD, "[ DbLoad(%s, %d, %s, -)", string(stem), fpath, bool(create)); /* open or else create index file fp */ debug0(DFS, D, " calling DefineFile from DbLoad (1)"); index_fnum = DefineFile(string(stem), INDEX_SUFFIX, &fpos(stem), INDEX_FILE, fpath); fp = OpenFile(index_fnum, create, FALSE); /* read first line of database index file, which should have the version */ if( fp != null ) { if( StringFGets(line, MAX_BUFF, fp) == NULL || !StringBeginsWith(&line[3], LOUT_VERSION) ) { /* out of date, pretend it isn't there at all */ StringRemove(FileName(index_fnum)); fp = null; } } if( fp == null && create ) { db = nilobj; debug0(DFS, D, " calling DefineFile from DbLoad (2)"); dfnum = DefineFile(string(stem), DATA_SUFFIX, &fpos(stem), DATABASE_FILE, DATABASE_PATH); dfpos = 0L; LexPush(dfnum, 0, DATABASE_FILE, 1, FALSE); t = LexGetToken(); dlnum = line_num(fpos(t)); while( type(t) == LBR ) { res = Parse(&t, StartSym, FALSE, FALSE); if( t != nilobj || type(res) != CLOSURE ) Error(33, 6, "syntax error in database file %s", FATAL, &fpos(res), FileName(dfnum)); assert( symbs != nilobj, "DbLoad: create && symbs == nilobj!" ); if( symbs != nilobj ) { for( link = Down(symbs); link != symbs; link = NextDown(link) ) { Child(y, link); if( type(y) == CLOSURE && actual(y) == actual(res) ) break; } if( link == symbs ) Error(33, 7, "%s found in database but not declared in %s line", FATAL, &fpos(res), SymName(actual(res)), KW_DATABASE); } for( tag = nilobj, link = Down(res); link != res; link = NextDown(link) ) { Child(par, link); if( type(par) == PAR && is_tag(actual(par)) && Down(par) != par ) { Child(tag, Down(par)); break; } } if( tag == nilobj ) Error(33, 8, "database symbol %s has no tag", FATAL, &fpos(res), SymName(actual(res))); tag = ReplaceWithTidy(tag, TRUE); /* && */ if( !is_word(type(tag)) ) Error(33, 9, "database symbol tag is not a simple word", FATAL, &fpos(res)); if( StringEqual(string(tag), STR_EMPTY) ) Error(33, 10, "database symbol tag is an empty word", FATAL,&fpos(res)); if( db == nilobj ) { StringCopy(line, FileName(dfnum)); i = StringLength(line) - StringLength(INDEX_SUFFIX); assert( i > 0, "DbLoad: FileName(dfnum) (1)!" ); StringCopy(&line[i], STR_EMPTY); db = DbCreate(MakeWord(WORD, line, &fpos(stem))); } DbInsert(db, FALSE, actual(res), string(tag), &fpos(tag), STR_ZERO, NO_FILE, dfpos, dlnum, TRUE); DisposeObject(res); dfpos = LexNextTokenPos(); t = LexGetToken(); dlnum = line_num(fpos(t)); } if( type(t) != END ) Error(33, 11, "%s or end of file expected here", FATAL, &fpos(t), KW_LBR); LexPop(); if( db == nilobj ) { StringCopy(line, FileName(dfnum)); i = StringLength(line) - StringLength(INDEX_SUFFIX); assert( i > 0, "DbLoad: FileName(dfnum) (2)!" ); StringCopy(&line[i], STR_EMPTY); db = DbCreate(MakeWord(WORD, line, &fpos(stem))); } DbConvert(db, FALSE); if( (fp = OpenFile(index_fnum, FALSE, FALSE)) == null || StringFGets(line, MAX_BUFF, fp) == NULL || !StringBeginsWith(&line[3], LOUT_VERSION) ) Error(33, 12, "cannot open database file %s", FATAL, &fpos(db), FileName(index_fnum)); } /* set up database record */ StringCopy(line, FileName(index_fnum)); i = StringLength(line) - StringLength(INDEX_SUFFIX); assert( i > 0, "DbLoad: FileName(index_fnum)!" ); StringCopy(&line[i], STR_EMPTY); db = MakeWord(WORD, line, &fpos(stem)); reading(db) = TRUE; in_memory(db) = in_mem; if( symbs != nilobj ) { assert( type(symbs) == ACAT, "DbLoad: type(symbs)!" ); Link(db, symbs); } if( fp == null ) { debug1(DBS, DD, "] DbLoad returning (empty) %s", string(db)); db_filep(db) = null; db_lines(db) = (LINE *) NULL; ifdebug(DPP, D, ProfileOff("DbLoad")); return db; } /* read header lines of index file, find its symbols */ leftp = 0; lnum = 1; gotline = StringFGets(line, MAX_BUFF, fp); while( gotline != NULL ) { if( line[0] != '0' || line[1] != '0' ) break; lnum++; leftp = (int) ftell(fp); gall = StringBeginsWith(line, AsciiToFull("00target ")); sscanf( (char *) line, gall ? "00target %d" : "00symbol %d", &num); for( i = 9; line[i] != CH_SPACE && line[i] != '\0'; i++ ); if( symbs == nilobj ) { /* any symbols are possible, full path names in index file required */ count = 0; sym = StartSym; while( line[i] != CH_NEWLINE && line[i] != '\0' ) { PushScope(sym, FALSE, FALSE); count++; sscanf( (char *) &line[i+1], "%s", sym_name); sym = SearchSym(sym_name, StringLength(sym_name)); i += StringLength(sym_name) + 1; } for( i = 1; i <= count; i++ ) PopScope(); } else { /* only symbs symbols possible, full path names not required */ sym = nilobj; sscanf( (char *) &line[i+1], "%s", sym_name); for( link = Down(symbs); link != symbs; link = NextDown(link) ) { Child(y, link); assert( type(y) == CLOSURE, "DbLoad: type(y) != CLOSURE!" ); if( StringEqual(sym_name, SymName(actual(y))) ) { sym = actual(y); break; } } } if( sym != nilobj && sym != StartSym ) { if( cross_sym(sym) == nilobj ) CrossInit(sym); Link(db, cross_sym(sym)); link = LastDown(db); number(link) = num; db_targ(link) = gall; if( gall ) is_extern_target(sym) = uses_extern_target(sym) = TRUE; } else { Error(33, 13, "undefined symbol in database file %s (line %d)", WARN, &fpos(db), FileName(index_fnum), lnum); debug1(DBS, DD, "] DbLoad returning %s (error)", string(db)); fclose(fp); in_memory(db) = FALSE; db_filep(db) = null; /* subsequently treated like an empty database */ ifdebug(DPP, D, ProfileOff("DbLoad")); return db; } gotline = StringFGets(line, MAX_BUFF, fp); } /* if in_memory, go on to read the entire database index into memory */ if( in_memory(db) ) { int len; if( gotline == NULL ) db_lines(db) = 0; else { db_lines(db) = ReadLines(fp, FileName(index_fnum), line, &len); db_lineslen(db) = len; SortLines(db_lines(db), db_lineslen(db)); } } else /* external, save leftpos and file pointer */ { db_filep(db) = fp; left_pos(db) = leftp; } /* return */ debug1(DBS, DD, "] DbLoad returning %s", string(db)); ifdebug(DPP, D, ProfileOff("DbLoad")); return db; } /* end DbLoad */ /*@::SearchFile()@************************************************************/ /* */ /* static BOOLEAN SearchFile(fp, left, right, str, line) */ /* */ /* File fp is a text file. left is the beginning of a line, right is the */ /* end of a line. Search the file by binary search for a line beginning */ /* with str. If found, return it in line, else return FALSE. */ /* */ /*****************************************************************************/ static BOOLEAN SearchFile(FILE *fp, int left, int right, FULL_CHAR *str, FULL_CHAR *line) { int l, r, mid, mid_end; FULL_CHAR buff[MAX_BUFF]; BOOLEAN res; ifdebug(DPP, D, ProfileOn("SearchFile")); debug3(DBS, DD, "SearchFile(fp, %d, %d, %s, line)", left, right, str); l = left; r = right; while( l <= r ) { /* loop invt: (l==0 or fp[l-1]==CH_NEWLINE) and (fp[r] == CH_NEWLINE) */ /* and first key >= str lies in the range fp[l..r+1] */ /* find line near middle of the range; mid..mid_end brackets it */ debug2(DBS, DD, " start loop: l = %d, r = %d", l, r); mid = (l + r)/2; fseek(fp, (long) mid, SEEK_SET); do { mid++; } while( getc(fp) != CH_NEWLINE ); if( mid == r + 1 ) { mid = l; fseek(fp, (long) mid, SEEK_SET); } StringFGets(line, MAX_BUFF, fp); mid_end = (int) ftell(fp) - 1; debug3(DBS, DD, " mid: %d, mid_end: %d, line: %s", mid, mid_end, line); assert( l <= mid, "SearchFile: l > mid!" ); assert( mid < mid_end, "SearchFile: mid >= mid_end!" ); assert( mid_end <= r, "SearchFile: mid_end > r!" ); /* compare str with this line and prepare next step */ debug2(DBS, DD, " comparing key %s with line %s", str, line); if( TabbedStringLessEqual(str, line) ) r = mid - 1; else l = mid_end + 1; } /* end while */ /* now first key >= str lies in fp[l]; compare it with str */ if( l < right ) { fseek(fp, (long) l, SEEK_SET); StringFGets(line, MAX_BUFF, fp); sscanf( (char *) line, "%[^\t]", buff); res = StringEqual(str, buff); } else res = FALSE; debug1(DBS, DD, "SearchFile returning %s", bool(res)); ifdebug(DPP, D, ProfileOff("SearchFile")); return res; } /* end SearchFile */ /*@::SearchLines()@***********************************************************/ /* */ /* static BOOLEAN SearchLines(LINE *lines, int left, int right, str, lnum) */ /* */ /* Search the sorted array of LINE arrays lines[left..right] for a line */ /* beginning with str, and return TRUE if found else FALSE. */ /* */ /* If TRUE is returned then the number of the line is in *lnum. */ /* */ /*****************************************************************************/ static BOOLEAN SearchLines(LINE *lines, int left, int right, FULL_CHAR *str, int *lnum) { int l, r, mid; FULL_CHAR buff[MAX_BUFF]; BOOLEAN res; debug3(DBS, D, "SearchLines(lines, %d, %d, %s, lnum)", left, right, str); if( right < left ) { debug0(DBS, D, "SearchLines returning FALSE (empty lines)"); return FALSE; } l = left; r = right - 1; while( l <= r ) { /* loop invt: first key >= str (if any) lies in the range lines[l..r+1] */ /* and left <= l <= right and r < right */ mid = (l + r) / 2; debug4(DBS, D, " [l %d, r %d] examining lines[%d] = %s", l, r, mid, lines[mid]); if( TabbedStringLessEqual(str, (FULL_CHAR *) lines[mid]) ) r = mid - 1; else l = mid + 1; } sscanf( (char *) lines[l], "%[^\t]", buff); if( StringEqual(str, buff) ) { res = TRUE; *lnum = l; debug1(DBS, D, "SearchLines returning TRUE (lnum %d)", *lnum); } else { res = FALSE; debug0(DBS, D, "SearchLines returning FALSE"); } return res; } /* end SearchLines */ /*@::DbRetrieve()@************************************************************/ /* */ /* BOOLEAN DbRetrieve(db, gall, sym, tag, seq, dfnum, dfpos, dlnum, cont) */ /* */ /* Retrieve the first entry of database db with the given gall, sym and */ /* tag. Set *seq, *dfnum, *dlnum, *dfpos to the associated value. */ /* Set *cont to a private value for passing to DbRetrieveNext. */ /* */ /*****************************************************************************/ BOOLEAN DbRetrieve(OBJECT db, BOOLEAN gall, OBJECT sym, FULL_CHAR *tag, FULL_CHAR *seq, FILE_NUM *dfnum, long *dfpos, int *dlnum, long *cont) { int symnum, lnum; FULL_CHAR line[MAX_BUFF], buff[MAX_BUFF]; ifdebug(DPP, D, ProfileOn("DbRetrieve")); debug4(DBS, DD, "DbRetrieve(%s, %s%s&%s)", string(db), gall ? "0" : "", SymName(sym), tag); /* check OK to proceed */ if( !reading(db) || db_filep(db) == null ) { debug0(DBS, DD, "DbRetrieve returning FALSE (empty or not reading)"); ifdebug(DPP, D, ProfileOff("DbRetrieve")); return FALSE; } /* convert parameters into search key */ SymToNum(db, sym, symnum, FALSE); sprintf( (char *) buff, "%s%d&%s", gall ? "0" : "", symnum, tag); if( in_memory(db) ) { /* search internal table, return if not found; set *cont to continuation */ if( !SearchLines(db_lines(db), 0, db_lineslen(db) - 1, buff, &lnum) ) { debug0(DBS, DD, "DbRetrieve returning FALSE (key not present)"); ifdebug(DPP, D, ProfileOff("DbRetrieve")); return FALSE; } sscanf( (char *) db_lines(db)[lnum], "%*[^\t]\t%[^\t]\t%*[^\t]\t%ld\t%d\t%[^\n]", seq, dfpos, dlnum, buff); *cont = lnum+1; } else { /* search for key in file, return if not found; set *cont to continuatn */ fseek(db_filep(db), 0L, SEEK_END); if( !SearchFile(db_filep(db), (int) left_pos(db), (int) ftell(db_filep(db)) - 1, buff, line) ) { debug0(DBS, DD, "DbRetrieve returning FALSE (key not present)"); ifdebug(DPP, D, ProfileOff("DbRetrieve")); return FALSE; } sscanf( (char *) line, "%*[^\t]\t%[^\t]\t%*[^\t]\t%ld\t%d\t%[^\n]", seq, dfpos, dlnum, buff); *cont = ftell(db_filep(db)); } /* work out file name if . abbreviation used, and possibly define file */ if( StringEqual(buff, AsciiToFull(".")) ) { StringCopy(buff, string(db)); } *dfnum = FileNum(buff, DATA_SUFFIX); if( *dfnum == NO_FILE ) /* can only occur in cross reference database */ { debug0(DFS, D, " calling DefineFile from DbRetrieve"); *dfnum = DefineFile(buff, DATA_SUFFIX, &fpos(db), DATABASE_FILE, SOURCE_PATH); } /* return */ debug3(DBS, DD, "DbRetrieve returning TRUE (in %s at %ld, line %d)", FileName(*dfnum), *dfpos, *dlnum); ifdebug(DPP, D, ProfileOff("DbRetrieve")); return TRUE; } /* end DbRetrieve */ /*@::DbRetrieveNext()@********************************************************/ /* */ /* BOOLEAN DbRetrieveNext(db, gall, sym, tag, seq, dfnum, dfpos,dlnum,cont) */ /* */ /* Retrieve the entry of database db pointed to by *cont. */ /* Set *gall, *sym, *tag, *seq, *dfnum, *dlnum, *dfpos to the value. */ /* Reset *cont to the next entry for passing to the next DbRetrieveNext. */ /* */ /*****************************************************************************/ BOOLEAN DbRetrieveNext(OBJECT db, BOOLEAN *gall, OBJECT *sym, FULL_CHAR *tag, FULL_CHAR *seq, FILE_NUM *dfnum, long *dfpos, int *dlnum, long *cont) { FULL_CHAR line[MAX_BUFF], *cline, fname[MAX_BUFF]; int symnum; ifdebug(DPP, D, ProfileOn("DbRetrieveNext")); debug2(DBS, DD, "DbRetrieveNext( %s, %ld )", string(db), *cont); assert(reading(db), "DbRetrieveNext: not reading"); /* check OK to proceed */ if( db_filep(db) == null ) { debug0(DBS, DD, "DbRetrieveNext returning FALSE (empty database)"); ifdebug(DPP, D, ProfileOff("DbRetrieveNext")); return FALSE; } if( in_memory(db) ) { /* get next entry from internal database */ if( *cont >= db_lineslen(db) ) { debug0(DBS, DD, "DbRetrieveNext returning FALSE (no successor)"); ifdebug(DPP, D, ProfileOff("DbRetrieveNext")); return FALSE; } cline = (FULL_CHAR *) db_lines(db)[*cont]; *gall = (cline[0] == '0' ? 1 : 0); sscanf((char *)&cline[*gall], "%d&%[^\t]\t%[^\t]\t%*[^\t]\t%ld\t%d\t%[^\n]", &symnum, tag, seq, dfpos, dlnum, fname); *cont = *cont + 1; } else { /* use *cont to find position of next entry; advance *cont */ fseek(db_filep(db), *cont == 0L ? (long) left_pos(db) : *cont, SEEK_SET); if( StringFGets(line, MAX_BUFF, db_filep(db)) == NULL ) { debug0(DBS, DD, "DbRetrieveNext returning FALSE (no successor)"); ifdebug(DPP, D, ProfileOff("DbRetrieveNext")); return FALSE; } *gall = (line[0] == '0' ? 1 : 0); sscanf((char *)&line[*gall], "%d&%[^\t]\t%[^\t]\t%*[^\t]\t%ld\t%d\t%[^\n]", &symnum, tag, seq, dfpos, dlnum, fname); *cont = ftell(db_filep(db)); } /* work out file name if . abbreviation used, and possibly define file */ if( StringEqual(fname, AsciiToFull(".")) ) { StringCopy(fname, string(db)); } *dfnum = FileNum(fname, DATA_SUFFIX); if( *dfnum == NO_FILE ) /* can only occur in cross reference database */ { debug0(DFS, D, " calling DefineFile from DbRetrieveNext"); *dfnum = DefineFile(fname, DATA_SUFFIX, &fpos(db), DATABASE_FILE, SOURCE_PATH); } NumToSym(db, symnum, *sym); /* return */ debug3(DBS, DD, "DbRetrieveNext returning TRUE (in %s at %ld, line %d)", FileName(*dfnum), *dfpos, *dlnum); ifdebug(DPP, D, ProfileOff("DbRetrieveNext")); return TRUE; } /* end DbRetrieveNext */