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* plumbing: now core was renamed to core, and formats and clients moved inside
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* core: ObjectStorage, ReferenceStorage renamed to ObjectStorer and
ReferenceStorer
* rebase
* general, changes request by @alcortes
* general, changes request by @alcortes
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* storage/filesystem: added ObjectStorage Set.
* storage/filesystem: now passes all tests, except those specific to transactions.
* formats/config: Encoder now encodes subsections with no options.
* formats/config: add HasSubsection on Section.
* dotgit: add Ref method to get specific reference.
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